Skip to main content

Nested list to graph


The following nested list can be regarded as a representation of a (tree) graph:


li = {"fig", {"date", {"kumquat"}, {"papaya", {"peach"}, {"apple"}}},
{"mango", {"orange", {"pear"}, {"avocado"}}},
{"banana"}}


In the above, a string is a node in the tree, and any lists that follow it are subtrees rooted at that node.


What are some of the ways by which this can be converted into a graph (or more concretely, a list of DirectedEdges)? I've come up with one way, listed below. But I wanted to learn about other interesting approaches - for instance, pattern replacements might be used?


This is what I came up with:


h[{str_String}] := Sequence[];
h[{str_String, ls__List}] := {DirectedEdge[str, #[[1]]], h@#} & /@ {ls};

edges = Flatten@h@li

(*
{"fig" \[DirectedEdge] "date", "date" \[DirectedEdge] "kumquat",

"date" \[DirectedEdge] "papaya", "papaya" \[DirectedEdge] "peach",
"papaya" \[DirectedEdge] "apple", "fig" \[DirectedEdge] "mango",
"mango" \[DirectedEdge] "orange", "orange" \[DirectedEdge] "pear",
"orange" \[DirectedEdge] "avocado", "fig" \[DirectedEdge] "banana"}
*)

TreePlot[Rule @@@ edges, Automatic, "fig", DirectedEdges -> True,
VertexLabeling -> True]

Don't you wish this were an actual tree?




Answer



edges = Cases[li,
{node_String, subtrees__List} :> (
node \[DirectedEdge] #[[1]] & /@ {subtrees}),
{0, ∞}] // Flatten

Note the level specification within Cases.


Graph[edges,
VertexLabels -> "Name",
ImagePadding -> 30,

GraphLayout -> {
"LayeredEmbedding",
"RootVertex" -> "fig"}]

Comments

Popular posts from this blog

plotting - How to draw lines between specified dots on ListPlot?

I would like to create a plot where I have unconnected dots and some connected. So far, I have figured out how to draw the dots. My code is the following: ListPlot[{{1, 1}, {2, 2}, {3, 3}, {4, 4}, {1, 4}, {2, 5}, {3, 6}, {4, 7}, {1, 7}, {2, 8}, {3, 9}, {4, 10}, {1, 10}, {2, 11}, {3, 12}, {4,13}, {2.5, 7}}, Ticks -> {{1, 2, 3, 4}, None}, AxesStyle -> Thin, TicksStyle -> Directive[Black, Bold, 12], Mesh -> Full] I have thought using ListLinePlot command, but I don't know how to specify to the command to draw only selected lines between the dots. Do have any suggestions/hints on how to do that? Thank you. Answer One possibility would be to use Epilog with Line : ListPlot[ {{1, 1}, {2, 2}, {3, 3}, {4, 4}, {1, 4}, {2, 5}, {3, 6}, {4, 7}, {1, 7}, {2, 8}, {3, 9}, {4, 10}, {1, 10}, {2, 11}, {3, 12}, {4, 13}, {2.5, 7}}, Ticks -> {{1, 2, 3, 4}, None}, AxesStyle -> Thin, TicksStyle -> Directive[Black, Bold, 12], Mesh -> Full, Epilog -> { Line[ ...

list manipulation - Selecting multiple columns from a matrix?

Sample data: data = { {{2013, 1, 1}, 24.13, 167.67, 231.82}, {{2013, 1, 2}, 32.15, 170.92, 225.99}, {{2013, 1, 3}, 35.43, 172.68, 221.67}, {{2013, 1, 4}, 36.73, 173.05, 218.32}, {{2013, 1, 5}, 58.19, 165.96, 197.05}, {{2013, 1, 6}, 69.99, 163.50, 187.52}, {{2013, 1, 7}, 71.37, 154.21, 175.58}, {{2013, 1, 8}, 72.51, 149.66, 163.25}}; I want a DateListPlot with three graphs, so for a matrix formed by columns 1 and 2, one for columns 1 and 3, and 1 for columns 1 and 4. At the moment I'm using this code: data2 = Transpose[{data[[All, 1]], data[[All, 2]]}]; data3 = Transpose[{data[[All, 1]], data[[All, 3]]}]; data4 = Transpose[{data[[All, 1]], data[[All, 4]]}]; DateListPlot[{data2, data3, data4}, Joined -> True, Filling -> {3 -> {1}}] but I have a hunch that this can be done more efficiently. I don't like the Transpose s in particular. Any ideas? edit (for extra credit) What if I need to multiply the second column by 2, which in my solution is simp...

calculus and analysis - Integral of the Sinc product

Let us consider the following integral $$ B_n = \int_0^\infty \prod_{k=1,3,5,\dots}^n\frac{\sin (x/k)}{x/k}dx $$ By definition, Sinc[x] == Sin[x]/x , therefore B[n_?OddQ] := Integrate[Product[Sinc[x/k], {k, 1, n, 2}], {x, 0, Infinity}] B /@ Range[1, 13, 2] {Pi/2, Pi/2, Pi/2, Pi/2, Pi/2, Pi/2, Pi/2} OK, everything is fine. But... B[15] 467807924713440738696537864469 Pi/935615849440640907310521750000 What's going on? Answer As Eckhard wrote in comments B[n] is the n-th Borwein integral . (The letter B was not accidental :) ) This funny properties of Borwein integrals is related to the Fourier transform of Sinc function FourierTransform[Sinc[x], x, k] 1/2 Sqrt[Pi/2] (Sign[1 - k] + Sign[1 + k]) Plot[%, {k, -2, 2}, Filling -> 0] which is the box function. The result is $\pi/2$ while the sum $$ 1/3+1/5+\dots+1/n $$ B_n = \frac{\pi}{2} - \pi \bigg(\sum_{k=3,5,\ldots}^n\frac{1}{k} -1\biggr)^\frac{n-1}{2}\prod_{k=3,5,\dots}^n\frac{k}{k-1}. $$ For $n=15$ it is equal to $$ \frac{46780...