Skip to main content

linear algebra - How to know the usage of undocumented function like LinearAlgebra`BLAS?


BLAS is not documented in mathematica. Using



 ?LinearAlgebra`BLAS`*

gives


enter image description here


But None of the function has a detailed usage information


Click any of the function for example, GEMM, gives


enter image description here


At first I thought, BLAS in mma is belong to MKL, so I look up the usage in MKL reference manual, it says


call gemm ( a ,  b ,  c [ , transa ][ , transb ] [ , alpha ][ , beta ])


the last four parameters are all optional. But in fact, if I run


LinearAlgebra`BLAS`GEMM[a, b, c]

mma tells me, it needs 7 arguments



LinearAlgebraBLASGEMM::argrx: LinearAlgebraBLASGEMM called with 3 arguments; 7 arguments are expected.



if I run


LinearAlgebra`BLAS`GEMM[a, b, c, "N", "N", 1., 0.]


mma tells



LinearAlgebraBLASGEMM::blnsetst: The argument a at position 1 is not a string starting with one of the letters from the set NTCntc.



so the order of the arguments is not the same as MKL reference!!


How should I know the correct order of arguments without trying several times? Are there detailed usage information of undocumented function can be found inside mma?


I was wondering if we could extract usage from the content of the message tag like argrx or blnsetst ? But I don't know how to do it.



Answer



Update


Leaving my old answer below for historical reference, however as of version 11.2.0 (currently available on Wolfram Cloud and soon to be released as a desktop product) the low-level linear algebra functions have been documented, see



http://reference.wolfram.com/language/LowLevelLinearAlgebra/guide/BLASGuide.html




The comments by both Michael E2 and J. M. ♦ are already an excellent answer, so this is just my attempt at summarizing.


Undocumented means just what it says: there need not be any reference pages or usage messages, or any other kind of documentation. There are many undocumented functions and if you follow MSE regularly, you will encounter them often. Using such functionality, however, is not without its caveats.


Sometimes, functions (whether documented or undocumented) are written in top-level (Mathematica, or if you will, Wolfram Language) code, so one can inspect the actual implementation by spelunking. However, that is not the case for functions implemented in C as part of the kernel.


Particularly for the LinearAlgebra`BLAS` interface, the function signatures are kept quite close to the well-established FORTRAN conventions (which is also what MKL adheres to, see the guide for ?gemm) with a few non-surprising adjustments. For instance, consider


xGEMM( TRANSA, TRANSB, M, N, K, ALPHA, A, LDA, B, LDB, BETA, C, LDC )

and the corresponding syntax for LinearAlgebra`BLAS`GEMM which is


GEMM[ transa, transb, alpha, a, b, beta, c ]

where we can see the storage-related parameters such as dimensions and strides are omitted, since the kernel already knows how the matrices are laid out in memory. All other arguments are the same, and even come in the same order.



As an usage example,


a = {{1, 2}, {3, 4}}; b = {{5, 6}, {7, 8}}; c = b; (* c will be overwritten *)
LinearAlgebra`BLAS`GEMM["T", "N", -2, a, b, 1/2, c]; c

(* {{-(99/2), -57}, {-(145/2), -84}} *)

-2 Transpose[a].b + (1/2) b

(* {{-(99/2), -57}, {-(145/2), -84}} *)


Note that for machine precision matrices, Dot will end up calling the corresponding optimized xgemm function from MKL anyway, so I would not expect a big performance difference. It is certainly much more readable and easier to use Dot rather than GEMM for matrix multiplication.


On the topic of BLAS in Mathematica, I would also recommend the 2003 developer conference talk by Zbigniew Leyk, which has some further implementation details and examples.


Comments

Popular posts from this blog

functions - Get leading series expansion term?

Given a function f[x] , I would like to have a function leadingSeries that returns just the leading term in the series around x=0 . For example: leadingSeries[(1/x + 2)/(4 + 1/x^2 + x)] x and leadingSeries[(1/x + 2 + (1 - 1/x^3)/4)/(4 + x)] -(1/(16 x^3)) Is there such a function in Mathematica? Or maybe one can implement it efficiently? EDIT I finally went with the following implementation, based on Carl Woll 's answer: lds[ex_,x_]:=( (ex/.x->(x+O[x]^2))/.SeriesData[U_,Z_,L_List,Mi_,Ma_,De_]:>SeriesData[U,Z,{L[[1]]},Mi,Mi+1,De]//Quiet//Normal) The advantage is, that this one also properly works with functions whose leading term is a constant: lds[Exp[x],x] 1 Answer Update 1 Updated to eliminate SeriesData and to not return additional terms Perhaps you could use: leadingSeries[expr_, x_] := Normal[expr /. x->(x+O[x]^2) /. a_List :> Take[a, 1]] Then for your examples: leadingSeries[(1/x + 2)/(4 + 1/x^2 + x), x] leadingSeries[Exp[x], x] leadingSeries[(1/x + 2 + (1 - 1/x...

How to thread a list

I have data in format data = {{a1, a2}, {b1, b2}, {c1, c2}, {d1, d2}} Tableform: I want to thread it to : tdata = {{{a1, b1}, {a2, b2}}, {{a1, c1}, {a2, c2}}, {{a1, d1}, {a2, d2}}} Tableform: And I would like to do better then pseudofunction[n_] := Transpose[{data2[[1]], data2[[n]]}]; SetAttributes[pseudofunction, Listable]; Range[2, 4] // pseudofunction Here is my benchmark data, where data3 is normal sample of real data. data3 = Drop[ExcelWorkBook[[Column1 ;; Column4]], None, 1]; data2 = {a #, b #, c #, d #} & /@ Range[1, 10^5]; data = RandomReal[{0, 1}, {10^6, 4}]; Here is my benchmark code kptnw[list_] := Transpose[{Table[First@#, {Length@# - 1}], Rest@#}, {3, 1, 2}] &@list kptnw2[list_] := Transpose[{ConstantArray[First@#, Length@# - 1], Rest@#}, {3, 1, 2}] &@list OleksandrR[list_] := Flatten[Outer[List, List@First[list], Rest[list], 1], {{2}, {1, 4}}] paradox2[list_] := Partition[Riffle[list[[1]], #], 2] & /@ Drop[list, 1] RM[list_] := FoldList[Transpose[{First@li...

front end - keyboard shortcut to invoke Insert new matrix

I frequently need to type in some matrices, and the menu command Insert > Table/Matrix > New... allows matrices with lines drawn between columns and rows, which is very helpful. I would like to make a keyboard shortcut for it, but cannot find the relevant frontend token command (4209405) for it. Since the FullForm[] and InputForm[] of matrices with lines drawn between rows and columns is the same as those without lines, it's hard to do this via 3rd party system-wide text expanders (e.g. autohotkey or atext on mac). How does one assign a keyboard shortcut for the menu item Insert > Table/Matrix > New... , preferably using only mathematica? Thanks! Answer In the MenuSetup.tr (for linux located in the $InstallationDirectory/SystemFiles/FrontEnd/TextResources/X/ directory), I changed the line MenuItem["&New...", "CreateGridBoxDialog"] to read MenuItem["&New...", "CreateGridBoxDialog", MenuKey["m", Modifiers-...