Skip to main content

save - Saving memoization to disk


I like using memoization (i.e. the construct myFunction[x_]:=myFunction[x]=...) when I have a heavy function that I need to re-evaluate on the same arguments. However, I find it frustrating that each time I quit the kernel(s), all the advantage goes lost.


Is there a way of saving the results? I can think of a very cumbersome way of doing it, such as this block upon defining our function


memo = If[FileExistsQ[FileNameJoin[{Directory[], "memo.mx"}]], Import["memo.mx"], {}];
myFunction[x_] := Module[{value = ...},
AppendTo[memo, "myFunction[" <> ToString[x] <> "]=" <> ToString[value]];
Export["memo.mx", Union@memo];

myFunction[x] = value]
Evaluate[ToExpression/@memo];

Is this okay, or is there a better (or even designated) way of doing this?



Answer



Not much different from your approach and maybe not the best/safest approach, but DumpSave helps a bit because at least you don't have to works with strings:


cacheFile = FileNameJoin[{$TemporaryDirectory, "fibonacciCache" <> ".mx"}];
If[FileExistsQ[cacheFile],
Get[cacheFile],
fibonacci[1] = 1;

fibonacci[2] = 1;
fibonacci[n_Integer] := Module[{},
fibonacci[n] = fibonacci[n - 1] + fibonacci[n - 2];
DumpSave[cacheFile, fibonacci];
fibonacci[n]
]
]

For example




In[3]:= fibonacci[500] // Timing


Out[3]= {0.562500, \ 1394232245616978801397243828704072839500702565876973072641089629483255\ 71622863290691557658876222521294125}



Now Quit[]-ing and reevaluating the previous cell:



In[3]:= fibonacci[500] // Timing


Out[3]= {0., \ 1394232245616978801397243828704072839500702565876973072641089629483255\ 71622863290691557658876222521294125}



Comments

Popular posts from this blog

front end - keyboard shortcut to invoke Insert new matrix

I frequently need to type in some matrices, and the menu command Insert > Table/Matrix > New... allows matrices with lines drawn between columns and rows, which is very helpful. I would like to make a keyboard shortcut for it, but cannot find the relevant frontend token command (4209405) for it. Since the FullForm[] and InputForm[] of matrices with lines drawn between rows and columns is the same as those without lines, it's hard to do this via 3rd party system-wide text expanders (e.g. autohotkey or atext on mac). How does one assign a keyboard shortcut for the menu item Insert > Table/Matrix > New... , preferably using only mathematica? Thanks! Answer In the MenuSetup.tr (for linux located in the $InstallationDirectory/SystemFiles/FrontEnd/TextResources/X/ directory), I changed the line MenuItem["&New...", "CreateGridBoxDialog"] to read MenuItem["&New...", "CreateGridBoxDialog", MenuKey["m", Modifiers-...

How to thread a list

I have data in format data = {{a1, a2}, {b1, b2}, {c1, c2}, {d1, d2}} Tableform: I want to thread it to : tdata = {{{a1, b1}, {a2, b2}}, {{a1, c1}, {a2, c2}}, {{a1, d1}, {a2, d2}}} Tableform: And I would like to do better then pseudofunction[n_] := Transpose[{data2[[1]], data2[[n]]}]; SetAttributes[pseudofunction, Listable]; Range[2, 4] // pseudofunction Here is my benchmark data, where data3 is normal sample of real data. data3 = Drop[ExcelWorkBook[[Column1 ;; Column4]], None, 1]; data2 = {a #, b #, c #, d #} & /@ Range[1, 10^5]; data = RandomReal[{0, 1}, {10^6, 4}]; Here is my benchmark code kptnw[list_] := Transpose[{Table[First@#, {Length@# - 1}], Rest@#}, {3, 1, 2}] &@list kptnw2[list_] := Transpose[{ConstantArray[First@#, Length@# - 1], Rest@#}, {3, 1, 2}] &@list OleksandrR[list_] := Flatten[Outer[List, List@First[list], Rest[list], 1], {{2}, {1, 4}}] paradox2[list_] := Partition[Riffle[list[[1]], #], 2] & /@ Drop[list, 1] RM[list_] := FoldList[Transpose[{First@li...

mathematical optimization - Minimizing using indices, error: Part::pkspec1: The expression cannot be used as a part specification

I want to use Minimize where the variables to minimize are indices pointing into an array. Here a MWE that hopefully shows what my problem is. vars = u@# & /@ Range[3]; cons = Flatten@ { Table[(u[j] != #) & /@ vars[[j + 1 ;; -1]], {j, 1, 3 - 1}], 1 vec1 = {1, 2, 3}; vec2 = {1, 2, 3}; Minimize[{Total@((vec1[[#]] - vec2[[u[#]]])^2 & /@ Range[1, 3]), cons}, vars, Integers] The error I get: Part::pkspec1: The expression u[1] cannot be used as a part specification. >> Answer Ok, it seems that one can get around Mathematica trying to evaluate vec2[[u[1]]] too early by using the function Indexed[vec2,u[1]] . The working MWE would then look like the following: vars = u@# & /@ Range[3]; cons = Flatten@{ Table[(u[j] != #) & /@ vars[[j + 1 ;; -1]], {j, 1, 3 - 1}], 1 vec1 = {1, 2, 3}; vec2 = {1, 2, 3}; NMinimize[ {Total@((vec1[[#]] - Indexed[vec2, u[#]])^2 & /@ R...