Skip to main content

plotting - How to make a ArrayPlot/MatrixPlot in polar coordinates?


in fact, I want to plot a image like: two charts


Fig1 The picture above is from a paper Zhou K.-J. et al. 2014 about ion up-flow of ionosphere.


In MATLAB, there is a specialized function pcolor which could produce a similar effect:


n = 20;r = (0:n)'/n;
theta = pi*(-n:n)/n;
X = r*cos(theta);Y = r*sin(theta);
C = r*cos(2*theta);

pcolor(X,Y,C)

output:


result of pcolor


Fig 2


It's very close to what I want except some details like there are quadrilaterals rather than segments of circle and ugly mesh and ticks, nonetheless, the picture above is acceptable, though not perfect.


However, I hope I could use Mathematica to solve this problem. I thought ArrayPlot or MatrixPlot would help, however, I can't found any options like 'polar coordinates' in these two functions. When I try something like:


n = 20; r = Range[40.]/20; theta = Pi Range[40.]/20;
m = Table[r1 Cos[2. theta1], {theta1, theta}, {r1, r}]


and plot:


ArrayPlot[m, ColorFunction -> "Rainbow", PlotRangePadding -> 0, 
FrameLabel -> {"theta", "r"}, LabelStyle -> 22]

I only get this rectangle picture:


ArrayPlot result


Fig 3


how can I turn it into a 'pie-chart-style' picture?



Answer



Let me use this as example data instead (your m is too big):



m = RandomReal[1, {4, 24}];


polararrayplot[array_, colourfunc_] := SectorChart[
Map[Style[{1, 1}, colourfunc[#]] &, array, {2}],
SectorSpacing -> None
];
polararrayplot[m, ColorData["Rainbow", #] &]

polar array plot




The code is fairly self-explanatory. I'm sure you know where to modify things to suit your needs.


grid[polarticks_, radialticks_, radialaxispos_] := SectorChart[
{{1, 1}},
ChartStyle -> Directive[EdgeForm[], Opacity[0]],
PolarAxes -> True,
PolarAxesOrigin -> {radialaxispos, 1},
PolarGridLines -> {False, Range[0, 1, 1/Length[radialticks]]},
PolarTicks -> {
Transpose[{

Most@Range[0, 2 Pi, 2 Pi/Length[polarticks]],
polarticks
}],
Transpose[{
Rest@Range[0, 1, 1/Length[radialticks]],
radialticks
}]
}
];
polararrayplot[array_, colourfunc_] := SectorChart[

Map[
Style[{1, 1/Length[array]}, {EdgeForm[colourfunc[#]], colourfunc[#]}] &,
array,
{2}
],
SectorSpacing -> None
];
Show[
polararrayplot[m, ColorData["Rainbow", #] &],
grid[{18, 12, 6, 0}, {80, 70, 60, 50}, 14 Pi/8],

PlotRange -> All
]

polar array plot



Suppose that your data runs from 200 to 900, and not available is represented by 0:


min = 200;
max = 900;
m = ConstantArray[val, {4, 40}] /. val :> RandomChoice[{RandomReal[{min, max}], 0}];


Blank cells can be handled through a custom colour function, e.g.


colourize[val_] := If[
val == 0,
White,
ColorData["Rainbow", (val - min)/(max - min)]
];

Now,


Show[
polararrayplot[m, colourize],

grid[{18, 12, 6, 0}, {80, 70, 60, 50}, 14 Pi/8],
PlotRange -> All
]

produces


polar array plot



Sadly, SectorChart does not support AxesStyle nor provide PolarAxesStyle as an option, so the look of the polar axes cannot be modified straightforwardly. Only the ticks (i.e. the ticks of the radial axis and the inner circles) can be styled with TicksStyle.


We'd better create our own grid:


grid[polarticks_, radialticks_, radialaxispos_] := Module[

{
ticksize, gapsize, polarlabelspace, font, circumference, innercircles,
tocartesian, gap, ptpos, rtpos
},
ticksize = 1/20;
gapsize = 1/5;
polarlabelspace = 1/5;
font = Directive[FontFamily -> "Helvetica", FontSize -> 20];
circumference = Directive[Black, AbsoluteThickness[1.5]];
innercircles = Directive[Black, AbsoluteThickness[1]];

gap[r_] := {
radialaxispos - 2 Pi + (gapsize/2)/r,
radialaxispos - (gapsize/2)/r
};
tocartesian = CoordinateTransformData["Polar" -> "Cartesian", "Mapping"];
ptpos = Most@Range[0, 2 Pi, 2 Pi/Length[polarticks]];
rtpos = Rest@Range[0, 1, 1/Length[radialticks]];
Graphics[{
{
circumference,

Circle[{0, 0}, 1, gap[1]],
Line[{tocartesian@{1, #}, tocartesian@{1 + ticksize, #}}] & /@ ptpos
},
{
innercircles,
Circle[{0, 0}, #, gap[#]] & /@ Most[rtpos]
},
{
font,
MapThread[

Text[#1, tocartesian@{#2, radialaxispos}] &,
{radialticks, rtpos}
],
MapThread[
Text[
#1,
tocartesian@{1 + ticksize, #2},
tocartesian@{1 + polarlabelspace, Pi + #2}
] &,
{polarticks, ptpos}

]
}
}]
];

Now,


Show[
polararrayplot[m, colourize],
grid[{18, 12, 6, 0}, {80, 70, 60, 50}, 14 Pi/8],
PlotRange -> All

]

produces


polar array plot


Let me use example data that looks more like that in the paper.


m = ConstantArray[0, {40, 8}];
For[j = 1, j <= 40, j++,
For[i = 1, i <= 8, i++,
m[[j, i]] = If[2 < j < 30,
If[2 < j < 30, If[2 < i < 7,

RandomReal[{min, max}],
Which[
i == 1 || i == 7, foo = RandomChoice[{0, RandomReal[{min, max}]}],
i == 2, If[foo == 0, bar, RandomReal[{min, max}]],
i == 8, If[foo == 0, 0, bar]]], 0], 0]]];
m = Transpose@(m /. bar :> RandomChoice[{0, RandomReal[{min, max}]}]);
Show[
polararrayplot[m, colourize],
grid[{18, 12, 6, 0}, {80, 70, 60, 50}, 10 Pi/8],
PlotRange -> All

]

polar array plot


Comments

Popular posts from this blog

plotting - How to draw lines between specified dots on ListPlot?

I would like to create a plot where I have unconnected dots and some connected. So far, I have figured out how to draw the dots. My code is the following: ListPlot[{{1, 1}, {2, 2}, {3, 3}, {4, 4}, {1, 4}, {2, 5}, {3, 6}, {4, 7}, {1, 7}, {2, 8}, {3, 9}, {4, 10}, {1, 10}, {2, 11}, {3, 12}, {4,13}, {2.5, 7}}, Ticks -> {{1, 2, 3, 4}, None}, AxesStyle -> Thin, TicksStyle -> Directive[Black, Bold, 12], Mesh -> Full] I have thought using ListLinePlot command, but I don't know how to specify to the command to draw only selected lines between the dots. Do have any suggestions/hints on how to do that? Thank you. Answer One possibility would be to use Epilog with Line : ListPlot[ {{1, 1}, {2, 2}, {3, 3}, {4, 4}, {1, 4}, {2, 5}, {3, 6}, {4, 7}, {1, 7}, {2, 8}, {3, 9}, {4, 10}, {1, 10}, {2, 11}, {3, 12}, {4, 13}, {2.5, 7}}, Ticks -> {{1, 2, 3, 4}, None}, AxesStyle -> Thin, TicksStyle -> Directive[Black, Bold, 12], Mesh -> Full, Epilog -> { Line[ ...

equation solving - Invert and fit implicitly defined curve

I need to fit an implicitly defined curve. I thought I could get some data out of Solve , and then using FindFit . Therefore, I would like to find the relation the parametric curve defined by $F(x,y)=0$: Solve[-(1/2) + 1/2 (0.41202 BesselK[0, 0.1 Sqrt[x^2 + y^2]] + (0.101483 x BesselK[1, 0.1 Sqrt[x^2 + y^2]])/Sqrt[x^2 + y^2]) == 0, y] But I can't get an output: Solve was unable to solve the system with inexact coefficients or the system obtained by direct rationalization of inexact numbers present in the system. Since many of the methods used by Solve require exact input, providing Solve with an exact version of the system may help. >> Edit: In particular, I would like to fit the data coming from the curve with the expression of another curve, and not with a function $f(x)$. In particular, since this clearly looks like a cardioid , I would like it to fit to something like it. What other strategies could I try?

dynamic - How can I make a clickable ArrayPlot that returns input?

I would like to create a dynamic ArrayPlot so that the rectangles, when clicked, provide the input. Can I use ArrayPlot for this? Or is there something else I should have to use? Answer ArrayPlot is much more than just a simple array like Grid : it represents a ranged 2D dataset, and its visualization can be finetuned by options like DataReversed and DataRange . These features make it quite complicated to reproduce the same layout and order with Grid . Here I offer AnnotatedArrayPlot which comes in handy when your dataset is more than just a flat 2D array. The dynamic interface allows highlighting individual cells and possibly interacting with them. AnnotatedArrayPlot works the same way as ArrayPlot and accepts the same options plus Enabled , HighlightCoordinates , HighlightStyle and HighlightElementFunction . data = {{Missing["HasSomeMoreData"], GrayLevel[ 1], {RGBColor[0, 1, 1], RGBColor[0, 0, 1], GrayLevel[1]}, RGBColor[0, 1, 0]}, {GrayLevel[0], GrayLevel...