Skip to main content

parallelization - $IterationLimit and parallel computing


Short question: How can you set $IterationLimit for parallel computation?


I thought just setting $IterationLimit = Infinity would work but it doesn't. I still get Iteration limit exceeded errors. A bit of sample code below:


fff[0] = 1;
fff[p_] := fff[p - 1] (*simple function*)
limit = $IterationLimit (*checking $IterationLimit*)

fff[limit + 1000] (*this should give $IterationLimit::itlim error*)


ParallelTable[fff[i], {i, limit + 1000, limit + 1004}] (*this should also give multiple $IterationLimit::itlim errors*)

$IterationLimit = Infinity; (*setting infinite $IterationLimit*)

fff[limit + 1000] (*now this should compute without errors*)

ParallelTable[fff[i], {i, limit + 1000, limit + 1004}] (*this shouldn't give any errors either but for me it throws $IterationLimit::itlim errors*)

Answer



When using parallelization in Mathematica, it is very important to understand that the "parallel threads" are completely separate kernel processes. Assume that any communication between the main kernel and subkernels needs to be explicit (though there is some automation since version 8: DistributeDefinitions is done automatically in many cases).


Since fff is defined by you, the user, in the Global` context, the definition of fff is automatically distributed to the subkernels (in v8 and later) by ParallelTable and you don't need to use DistributeDefinitions explicitly. However, $IterationLimit is a system symbol, and it won't be distributed.



If you set $IterationLimit on the main kernel, it will only have an effect on the main kernel.


The subkernels have their own $IterationLimit which you need to set separately with the aid of ParallelEvaluate. (Do not use DistributeDefinitions in this case.)


ParallelEvaluate[$IterationLimit = ...]

Comments

Popular posts from this blog

plotting - How to draw lines between specified dots on ListPlot?

I would like to create a plot where I have unconnected dots and some connected. So far, I have figured out how to draw the dots. My code is the following: ListPlot[{{1, 1}, {2, 2}, {3, 3}, {4, 4}, {1, 4}, {2, 5}, {3, 6}, {4, 7}, {1, 7}, {2, 8}, {3, 9}, {4, 10}, {1, 10}, {2, 11}, {3, 12}, {4,13}, {2.5, 7}}, Ticks -> {{1, 2, 3, 4}, None}, AxesStyle -> Thin, TicksStyle -> Directive[Black, Bold, 12], Mesh -> Full] I have thought using ListLinePlot command, but I don't know how to specify to the command to draw only selected lines between the dots. Do have any suggestions/hints on how to do that? Thank you. Answer One possibility would be to use Epilog with Line : ListPlot[ {{1, 1}, {2, 2}, {3, 3}, {4, 4}, {1, 4}, {2, 5}, {3, 6}, {4, 7}, {1, 7}, {2, 8}, {3, 9}, {4, 10}, {1, 10}, {2, 11}, {3, 12}, {4, 13}, {2.5, 7}}, Ticks -> {{1, 2, 3, 4}, None}, AxesStyle -> Thin, TicksStyle -> Directive[Black, Bold, 12], Mesh -> Full, Epilog -> { Line[ ...

dynamic - How can I make a clickable ArrayPlot that returns input?

I would like to create a dynamic ArrayPlot so that the rectangles, when clicked, provide the input. Can I use ArrayPlot for this? Or is there something else I should have to use? Answer ArrayPlot is much more than just a simple array like Grid : it represents a ranged 2D dataset, and its visualization can be finetuned by options like DataReversed and DataRange . These features make it quite complicated to reproduce the same layout and order with Grid . Here I offer AnnotatedArrayPlot which comes in handy when your dataset is more than just a flat 2D array. The dynamic interface allows highlighting individual cells and possibly interacting with them. AnnotatedArrayPlot works the same way as ArrayPlot and accepts the same options plus Enabled , HighlightCoordinates , HighlightStyle and HighlightElementFunction . data = {{Missing["HasSomeMoreData"], GrayLevel[ 1], {RGBColor[0, 1, 1], RGBColor[0, 0, 1], GrayLevel[1]}, RGBColor[0, 1, 0]}, {GrayLevel[0], GrayLevel...

Is there a way to do conditional matrix loop using 'continue'

I have the following: n = 3; m = 5; ww = RandomReal[{0, 0.1}, {n, n}]; uu = RandomReal[{0, 1}, {m, n}]; pp = RandomReal[{0, 1}, {n, n}]; ss = RandomInteger[{0, 5}, {m, n}]; Grid[{{"ww", "uu", "pp", "ss"}, {ww // TableForm, uu // TableForm, pp // TableForm, ss // TableForm}}, Spacings -> {5, 2}, Dividers -> All] where I would like to look at every element of matrix ss and produce a matrix tt , with zeroes at the locations in ss which have zeroes, and in all other positions do the following: tt = (-1/Subscript[ww, m]) Log[(1 - uu)/(Subscript[pp, m - 1])], where Subscript[ww, m] is the value at index of ww matrix and where Subscript[pp, m - 1] is the value at index-1 of pp matrix. So for example if the first value ever read from matrix ss happens to be 2, then value taken from matrix ww would be from the row 2, but from pp would be from row 1. Also how to tell difference between a 0 as a valid value from within the matrix elemen...