Skip to main content

performance tuning - MapThread and Compile


After discovering that MapIndexed cannot be used with compile (see MapIndexed and Compile) I am now trying do implement similar functionality using a combination of MapThread and Map. Unfortunately I am running into problems even when only using MapThread.


Here is a test-scenario:


Create Lists first:


A = {{1, 2}, {2, 3}};
B = {{{1, 2, 3}, {2, 3, 4}}, {{2, 3, 4}, {3, 4, 5}}};


The I simply run MapThread with function List[] to obtain a suitable combination of those lists and put the whole thing inside a Compile-statement:


test = Compile[{{B, _Real, 3}, {A, _Real, 2}}, MapThread[List[#1, #2, #3] &, {B, A, A}, 2]];

But when running test[B,A] I get the following compile error:



CompiledFunction::cfex: Could not complete external evaluation at instruction 15; proceeding with uncompiled evaluation.



When using CompilePrint[test] instruction 15 shows a call to MainEvaluate.


Unfortunately I currently have no clue how to fix that problem. Any hint is appreciated.




Answer



Incorporating the comments into an answer:



I don't think you are allowed to have lists of that irregular shape, i.e. {{1, 2, 3}, 1, 1}. Note that it works as expected with Plus[#1,#2,#3]&. See for instance Compile[{}, Block[{a = {1, 2}, b = 3}, {a, b}]][]ssch Oct 15 '13 at 14:20


indeed, Compile only works with rectangular arrays of consistent type -- because otherwise they cannot be packed. Arrays in Compile are packed arrays, and ragged arrays destroy packing, and hence, compilation. – Andreas Lauschke Oct 15 '13 at 14:39



Comments

Popular posts from this blog

plotting - How to draw lines between specified dots on ListPlot?

I would like to create a plot where I have unconnected dots and some connected. So far, I have figured out how to draw the dots. My code is the following: ListPlot[{{1, 1}, {2, 2}, {3, 3}, {4, 4}, {1, 4}, {2, 5}, {3, 6}, {4, 7}, {1, 7}, {2, 8}, {3, 9}, {4, 10}, {1, 10}, {2, 11}, {3, 12}, {4,13}, {2.5, 7}}, Ticks -> {{1, 2, 3, 4}, None}, AxesStyle -> Thin, TicksStyle -> Directive[Black, Bold, 12], Mesh -> Full] I have thought using ListLinePlot command, but I don't know how to specify to the command to draw only selected lines between the dots. Do have any suggestions/hints on how to do that? Thank you. Answer One possibility would be to use Epilog with Line : ListPlot[ {{1, 1}, {2, 2}, {3, 3}, {4, 4}, {1, 4}, {2, 5}, {3, 6}, {4, 7}, {1, 7}, {2, 8}, {3, 9}, {4, 10}, {1, 10}, {2, 11}, {3, 12}, {4, 13}, {2.5, 7}}, Ticks -> {{1, 2, 3, 4}, None}, AxesStyle -> Thin, TicksStyle -> Directive[Black, Bold, 12], Mesh -> Full, Epilog -> { Line[ ...

equation solving - Invert and fit implicitly defined curve

I need to fit an implicitly defined curve. I thought I could get some data out of Solve , and then using FindFit . Therefore, I would like to find the relation the parametric curve defined by $F(x,y)=0$: Solve[-(1/2) + 1/2 (0.41202 BesselK[0, 0.1 Sqrt[x^2 + y^2]] + (0.101483 x BesselK[1, 0.1 Sqrt[x^2 + y^2]])/Sqrt[x^2 + y^2]) == 0, y] But I can't get an output: Solve was unable to solve the system with inexact coefficients or the system obtained by direct rationalization of inexact numbers present in the system. Since many of the methods used by Solve require exact input, providing Solve with an exact version of the system may help. >> Edit: In particular, I would like to fit the data coming from the curve with the expression of another curve, and not with a function $f(x)$. In particular, since this clearly looks like a cardioid , I would like it to fit to something like it. What other strategies could I try?

dynamic - How can I make a clickable ArrayPlot that returns input?

I would like to create a dynamic ArrayPlot so that the rectangles, when clicked, provide the input. Can I use ArrayPlot for this? Or is there something else I should have to use? Answer ArrayPlot is much more than just a simple array like Grid : it represents a ranged 2D dataset, and its visualization can be finetuned by options like DataReversed and DataRange . These features make it quite complicated to reproduce the same layout and order with Grid . Here I offer AnnotatedArrayPlot which comes in handy when your dataset is more than just a flat 2D array. The dynamic interface allows highlighting individual cells and possibly interacting with them. AnnotatedArrayPlot works the same way as ArrayPlot and accepts the same options plus Enabled , HighlightCoordinates , HighlightStyle and HighlightElementFunction . data = {{Missing["HasSomeMoreData"], GrayLevel[ 1], {RGBColor[0, 1, 1], RGBColor[0, 0, 1], GrayLevel[1]}, RGBColor[0, 1, 0]}, {GrayLevel[0], GrayLevel...